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 Minimum Complexity Machines


Scalable inference of spatial regions and temporal signatures from time series

arXiv.org Machine Learning

Regionalization aims to partition a spatial domain into contiguous regions that share similar characteristics, enabling more effective spatial analysis, policy making, and resource management. Existing approaches for spatial regionalization typically rely on static spatial snapshots rather than evolving time series. Meanwhile, most time series clustering methods ignore spatial structure or enforce spatial continuity through ad hoc regularization, constraining the number of inferred regions a priori either explicitly or implicitly. Utilizing the minimum description length principle from information theory, here we propose an efficient and fully nonparametric framework for the regionalization of spatial time series. Our method jointly infers a spatial partition along with a set of representative time series archetypes ("drivers") that best compress a spatiotemporal dataset, with a runtime log-linear in the number of time series. We demonstrate that this method can accurately recover planted regional structure and drivers in synthetic time series, and can extract meaningful structural regularities in large-scale empirical air quality and vegetation index records. Our method provides a principled and scalable framework for spatially contiguous partitioning, allowing interpretable temporal patterns and homogeneous regions to emerge directly from the data itself.


The Causal Description Gap: Information-Theoretic Separations Across Pearl's Hierarchy

arXiv.org Machine Learning

Pearl's causal hierarchy shows that observational, interventional, and counterfactual queries are qualitatively distinct. We ask a quantitative version of this question: how many additional bits are needed to specify higher-rung causal answers once lower-rung answers are known? We formalize this via query-class description length, the Kolmogorov complexity of the answer oracle induced by an SCM for a class of queries. Our main construction gives binary acyclic SCMs whose observational distribution has constant description length, while the single-variable interventional answer oracle has description length $ฮ˜(n^2)$. A degree-sensitive upper bound shows that finite-gate-schema SCMs of indegree $d$ have observational-interventional gap at most $O(nd \log(en/d) + n \log n)$, making the quadratic construction order-optimal in the dense regime and a rooted-tree construction order-optimal for bounded indegree. The quadratic separation persists under $\varepsilon$-accurate total-variation descriptions for every fixed $\varepsilon < 1/4$. At the next rung, the full hard-do interventional oracle can still leave a $ฮ˜(n)$ counterfactual description gap. A general ambiguity-to-bits theorem and Shannon analogue show that these gaps equal the logarithm of residual higher-rung ambiguity up to lower-order terms.


Minimum Description Length and Generalization Guarantees for Representation Learning

Neural Information Processing Systems

A major challenge in designing efficient statistical supervised learning algorithms is finding representations that perform well not only on available training samples but also on unseen data. While the study of representation learning has spurred much interest, most existing such approaches are heuristic; and very little is known about theoretical generalization guarantees. For example, the information bottleneck method seeks a good generalization by finding a minimal description of the input that is maximally informative about the label variable, where minimality and informativeness are both measured by Shannon's mutual information. In this paper, we establish a compressibility framework that allows us to derive upper bounds on the generalization error of a representation learning algorithm in terms of the "Minimum Description Length" (MDL) of the labels or the latent variables (representations). Rather than the mutual information between the encoder's input and the representation, which is often believed to reflect the algorithm's generalization capability in the related literature but in fact, falls short of doing so, our new bounds involve the "multi-letter" relative entropy between the distribution of the representations (or labels) of the training and test sets and a fixed prior.


Bivariate Causal Discovery Using Rate-Distortion MDL: An Information Dimension Approach

arXiv.org Machine Learning

Approaches to bivariate causal discovery based on the minimum description length (MDL) principle approximate the (uncomputable) Kolmogorov complexity of the models in each causal direction, selecting the one with the lower total complexity. The premise is that nature's mechanisms are simpler in their true causal order. Inherently, the description length (complexity) in each direction includes the description of the cause variable and that of the causal mechanism. In this work, we argue that current state-of-the-art MDL-based methods do not correctly address the problem of estimating the description length of the cause variable, effectively leaving the decision to the description length of the causal mechanism. Based on rate-distortion theory, we propose a new way to measure the description length of the cause, corresponding to the minimum rate required to achieve a distortion level representative of the underlying distribution. This distortion level is deduced using rules from histogram-based density estimation, while the rate is computed using the related concept of information dimension, based on an asymptotic approximation. Combining it with a traditional approach for the causal mechanism, we introduce a new bivariate causal discovery method, termed rate-distortion MDL (RDMDL). We show experimentally that RDMDL achieves competitive performance on the Tรผbingen dataset. All the code and experiments are publicly available at github.com/tiagobrogueira/Causal-Discovery-In-Exchangeable-Data.


Causal Discovery from Event Sequences by Local Cause-Effect Attribution

Neural Information Processing Systems

Sequences of events, such as crashes in the stock market or outages in a network, contain strong temporal dependencies, whose understanding is crucial to react to and influence future events. In this paper, we study the problem of discovering the underlying causal structure from event sequences. To this end, we introduce a new causal model, where individual events of the cause trigger events of the effect with dynamic delays. We show that in contrast to existing methods based on Granger causality, our model is identifiable for both instant and delayed effects.We base our approach on the Algorithmic Markov Condition, by which we identify the true causal network as the one that minimizes the Kolmogorov complexity. As the Kolmogorov complexity is not computable, we instantiate our model using Minimum Description Length and show that the resulting score identifies the causal direction. To discover causal graphs, we introduce the Cascade algorithm, which adds edges in topological order. Extensive evaluation shows that Cascade outperforms existing methods in settings with instantaneous effects, noise, and multiple colliders, and discovers insightful causal graphs on real-world data.


Introducing Routing Uncertainty in Capsule Networks

Neural Information Processing Systems

Rather than performing inefficient local iterative routing between adjacent capsule layers, we propose an alternative global view based on representing the inherent uncertainty in part-object assignment. In our formulation, the local routing iterations are replaced with variational inference of part-object connections in a probabilistic capsule network, leading to a significant speedup without sacrificing performance. In this way, global context is also considered when routing capsules by introducing global latent variables that have direct influence on the objective function, and are updated discriminatively in accordance with the minimum description length (MDL) principle. We focus on enhancing capsule network properties, and perform a thorough evaluation on pose-aware tasks, observing improvements in performance over previous approaches whilst being more computationally efficient.


Counterfactual Basis Extension and Representational Geometry: An MDL-Constrained Model of Conceptual Growth

arXiv.org Machine Learning

Concept learning becomes possible only when existing representations fail to account for experience. Most models of learning and inference, however, presuppose a fixed representational basis within which belief updating occurs. In this paper, I address a prior question: under what structural conditions can the representational basis itself expand in a principled and selective way? I propose a geometric framework in which conceptual growth is modeled as admissible basis extension evaluated under a Minimum Description Length (MDL) criterion. Experience, whether externally observed or internally simulated, is represented as vectors relative to a current conceptual subspace. Residual components capture systematic representational failure, and candidate conceptual extensions are restricted to low-rank, admissible transformations. I show that any MDL-accepted extension can be chosen so that its novel directions lie entirely within the residual span induced by experience, while extensions orthogonal to this span strictly increase description length and are therefore rejected. This yields a conservative account of imagination and conceptual innovation. Internally generated counterfactual representations contribute to learning only insofar as they expose or amplify structured residual error, and cannot introduce arbitrary novelty. I further distinguish representational counterfactuals--counterfactuals over an agent's conceptual basis--from causal or value-level counterfactuals, and show how MDL provides a normative selection principle governing representational change. Overall, the framework characterizes conceptual development as an error-driven, geometry-constrained process of basis extension, clarifying both the role and the limits of imagination in learning and theory change.


Softly Symbolifying Kolmogorov-Arnold Networks

arXiv.org Machine Learning

Kolmogorov-Arnold Networks (KANs) offer a promising path toward interpretable machine learning: their learnable activations can be studied individually, while collectively fitting complex data accurately. In practice, however, trained activations often lack symbolic fidelity, learning pathological decompositions with no meaningful correspondence to interpretable forms. We propose Softly Symbolified Kolmogorov-Arnold Networks (S2KAN), which integrate symbolic primitives directly into training. Each activation draws from a dictionary of symbolic and dense terms, with learnable gates that sparsify the representation. Crucially, this sparsification is differentiable, enabling end-to-end optimization, and is guided by a principled Minimum Description Length objective. When symbolic terms suffice, S2KAN discovers interpretable forms; when they do not, it gracefully degrades to dense splines. We demonstrate competitive or superior accuracy with substantially smaller models across symbolic benchmarks, dynamical systems forecasting, and real-world prediction tasks, and observe evidence of emergent self-sparsification even without regularization pressure.


Compressing Chemistry Reveals Functional Groups

arXiv.org Artificial Intelligence

We introduce the first formal large-scale assessment of the utility of traditional chemical functional groups as used in chemical explanations. Our assessment employs a fundamental principle from computational learning theory: a good explanation of data should also compress the data. We introduce an unsupervised learning algorithm based on the Minimum Message Length (MML) principle that searches for substructures that compress around three million biologically relevant molecules. We demonstrate that the discovered substructures contain most human-curated functional groups as well as novel larger patterns with more specific functions. We also run our algorithm on 24 specific bioactivity prediction datasets to discover dataset-specific functional groups. Fingerprints constructed from dataset-specific functional groups are shown to significantly outperform other fingerprint representations, including the MACCS and Morgan fingerprint, when training ridge regression models on bioactivity regression tasks.


The Limits of AI Explainability: An Algorithmic Information Theory Approach

arXiv.org Artificial Intelligence

This paper establishes a theoretical foundation for understanding the fundamental limits of AI explainability through algorithmic information theory. We formalize explainability as the approximation of complex models by simpler ones, quantifying both approximation error and explanation complexity using Kolmogorov complexity. Our key theoretical contributions include: (1) a complexity gap theorem proving that any explanation significantly simpler than the original model must differ from it on some inputs; (2) precise bounds showing that explanation complexity grows exponentially with input dimension but polynomially with error tolerance for Lipschitz functions; and (3) a characterization of the gap between local and global explainability, demonstrating that local explanations can be significantly simpler while maintaining accuracy in relevant regions. We further establish a regulatory impossibility theorem proving that no governance framework can simultaneously pursue unrestricted AI capabilities, human-interpretable explanations, and negligible error. These results highlight considerations likely to be relevant to the design, evaluation, and oversight of explainable AI systems.